bio-population-genetics-population-structure
GPTomicsAnalyze population structure using PCA and admixture analysis with PLINK and ADMIXTURE. Identify population clusters, assess ancestry proportions, visualize genetic structure, and choose optimal K for admixture models. Use when analyzing population stratification with PCA or admixture.
claw-ancestry-pca
manuelcorpasAncestry decomposition PCA against the Simons Genome Diversity Project
equity-scorer
ClawBioCompute HEIM diversity and equity metrics from VCF or ancestry data. Generates heterozygosity, FST, PCA plots, and a composite HEIM Equity Score with markdown reports.
vcf-annotator
manuelcorpasAnnotate VCF variants with VEP, ClinVar, gnomAD frequencies, and ancestry-aware context. Generates prioritised variant reports.
clawbio-pharmgx-reporter
ClawBioPharmacogenomic report from DTC genetic data (23andMe/AncestryDNA)
vcf-annotator
ClawBioAnnotate VCF variants with VEP, ClinVar, gnomAD frequencies, and ancestry-aware context. Generates prioritized variant reports.
equity-scorer
manuelcorpasCompute HEIM diversity and equity metrics from VCF or ancestry data. Generates heterozygosity, FST, PCA plots, and a composite HEIM Equity Score with markdown reports.
claw-ancestry-pca
ClawBioAncestry decomposition PCA against the Simons Genome Diversity Project
genome-compare
ClawBioCompare your genome to George Church (PGP-1) and estimate ancestry composition
clawbio-pharmgx-reporter
manuelcorpasPharmacogenomic report from DTC genetic data (23andMe/AncestryDNA)